For tiny creatures, swimming through water requires techniques very different than ours. Many, like this sea urchin larva, use hair-like cilia that they beat to push fluid near their bodies. The flows generated this way are beautiful and complex, as shown above. Importantly for the larva, the flows are asymmetric; that’s critical at these scales since any symmetric back-and-forth motion will keep the larva stuck in place. (Image credit: B. Shrestha et al.)
Tag: microorganisms
Jamming Inside
Worm-like Spirostomum ambiguum are millimeter-sized single-cell organisms that live in brackish waters. In milliseconds, these cells can retract to half their original length, generating g-forces greater than a Formula One driver experiences when cornering. How, researchers wondered, do these cells avoid shredding their internal structure with forces that strong?
Spirostomum ambiguum, they found, contain fluid-filled sacs called vacuoles that are entangled with the folds of a membrane-like structure called the endoplasmic reticulum. The researchers constructed a simulated cell, based on the properties of the living ones, and tested it under retraction. Without the endoplasmic reticulum, the insides of their model acted like a liquid, with vacuoles moving past one another readily. That’s not good for staying alive since swapping positions can disrupt bodily functions.
An artificially-colored micrograph highlights the different structures inside Spirostomum ambiguum. The red strings are a membrane-like endoplasmic reticulum entangled between yellow, fluid-filled vacuoles. With the vacuoles connected by a model endoplasmic reticulum, the cell’s insides acted more like a solid during retraction. The vacuoles deformed but fewer of them traded places, instead jamming together to prevent rearrangement. Mimicking this structure at a larger scale, the team suggests, could enable new types of shock absorbers. (Image and research credit: R. Chang and M. Prakash; via APS Physics)
Curved Cracks
When mixtures of particles and fluids dry, they typically leave a pattern of straight cracks. Here researchers explore what happens when the drying film contains bacteria from the family E. coli. Instead of straight cracks, the films form curved ones. With bacteria that rotate or tumble, the crack pattern is spiral-like. With bacteria that swim, the remaining pattern consists of circular cracks. Thus, the motility of the bacteria affects how cracks form and spread. (Image and research credit: Z. Liu et al.)
Recreating Infinity
In the ocean, tiny organisms can migrate hundreds of meters through the water column. Recreating and tracking those journeys in a lab is quite a challenge, but it’s one the researchers behind the Gravity Machine have conquered. This apparatus uses a wheel to essentially give micro-organisms an infinite water column to traverse while keeping them fixed in the lab microscope’s field of view.
With the device, researchers can watch organisms switch naturally between rising, sinking, and feeding behaviors as they would in the wild. The group is working to make it so that anyone with a microscope can recreate their set-up for observations. (Image, video, and research credit: D. Krishnamurthy et al.; see also Gravity Machine; submitted by Kam-Yung Soh)
Escaping the Limits of Viscosity
For large creatures, it’s not hard to feel the evidence of someone else swimming nearby. But to tiny swimmers water is incredibly viscous and hard to move. These creatures have to swim very differently than their larger cousins, and evidence of their motion dies out quickly. But at least one microorganism, Spirostomum ambiguum, has discovered a method for overcoming the limits of size and viscosity.
The single-celled swimmer, when threatened, contracts its body in milliseconds, generating accelerations greater than those seen by fighter pilots. That acceleration is strong enough that it generates a burst of turbulence powerful enough to overcome the natural damping of its viscous surroundings. Within their colonies, S. ambiguum seem to use contraction to send out hydrodynamic signals to neighbors, who pass on the call to arms. To see the colonies in action, check out this previous article. (Image and research credit: A. Mathijssen et al.; via Physics Today; submitted by Kam-Yung Soh)
Communication Between Microswimmers
The elongated cells of Spirostomum ambiguum swim using hair-like cilia, but when threatened, the cells contract violently, sending out long-range hydrodynamic waves, like those visualized above. Along with these waves, the cells release toxins aimed at whatever predator threatens them. In a colony, these waves act like a communication beacon. The swirl of a previous cell’s reaction tugs on its neighbors. As they contract, the message–and the toxins–spread. If the colony density is high enough, the hydrodynamic trigger waves will propagate through the entire colony, releasing enough toxins to disable even large predators. (Image and video credit: A. Mathijssen et al.)
Reducing Viscosity With Bacteria
Conventional wisdom – and the Second Law of Thermodynamics – require all fluids to have viscosity, with the noted and bizarre exception of superfluids, which can flow with zero viscosity. In essence, you cannot have work (i.e. flow) for free. Some effort has to be lost to resistance.
But scientists have discovered, bizarrely, that adding bacteria to water can result in zero or even negative viscosities – meaning that effort is required to keep the flow from accelerating. Before you ask, no, this is not a recipe for a perpetual motion machine. What happens when the bacteria-filled fluid is sheared is that the bacteria align and start collectively swimming. The local effects of each bacteria combine en masse to create a fluid that seemingly flows on its own. In the end, though, it’s the bacteria that are supplying that work. It certainly raises interesting prospects, though, for harnessing the power of bacterial superfluids. See the links below for more. (Image credit: M. Copeland, source; research credit: S. Guo et al., A. Loisy et al.; via Quanta; submitted by Kam-Yung Soh)
Swimming with Corkscrews
E. coli, like many bacteria, swim using corkscrew-like appendages called flagella. Because the bacteria are extremely tiny – their flagella may be less than ten microns long – their swimming is overwhelmingly dependent on viscosity. (Inertial effects are 100 to 10,000 times smaller than viscous effects for swimming E. coli.) Rotating their helical flagella generates viscous drag along the surface of the corkscrew. Because the flagella is asymmetric when you add all of those drag components together, the net force is thrust that moves the bacterium forward. Watch carefully in the animation above and you’ll see that E. coli have multiple flagella and will swing one out to the side during maneuvers. (Image credit: L. Turner et al., source; reproduced in a review by E. Lauga, pdf)
Starfish Vortices
Starfish larvae, like other microorganisms, use tiny hair-like cilia to move the fluid around them. By beating these cilia in opposite directions on different parts of their bodies, the larvae create vortices, as seen in the flow visualization above. The starfish larvae don’t use these vortices for swimming – to swim, you’d want to push all the fluid in the same direction. Instead the vortices help the larvae feed. The more vortices they create, the more it stirs the fluid around them and draws in algae from far away. The larvae actually switch gears regularly, using few vortices when they want to swim and more when they want to eat. Check out the full video below to see the full explanation and more beautiful footage. (Image/video credit: W. Gilpin et al.)
Swimming at Microscale
Tiny organisms live in a world dominated by viscosity. There’s no coasting or gliding. If a microorganism stops swimming, friction will bring it to a halt in less than the space of a hydrogen atom! To make matters worse, simply flapping an appendage forward and backward will get them nowhere. As we’ve seen before, these highly viscous laminar flows are reversible, meaning that a backward power stroke is simply undone by a mirrored forward recovery stroke. Instead, microorganisms like the paramecium swimming above are covered in tiny hairlike cilia which beat asymmetrically. They extend to their full length during the power stroke, but they stay bent during the forward recovery stroke. That asymmetry guarantees that they move more fluid backward than forward, thereby letting the paramecium make progress. (Image credit: C. Baroud, source)
